> For the complete documentation index, see [llms.txt](https://documentation.dnanexus.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://documentation.dnanexus.com/readme.md).

# Overview

## Using the DNAnexus Platform

{% content-ref url="/pages/-Ldk9eQQvXDt71K9CV4c" %}
[Getting Started](/getting-started.md)
{% endcontent-ref %}

Get to know commonly used features in a series of short, task-oriented tutorials.

{% content-ref url="/pages/-LdQr7ruDVEXczyOOPf5" %}
[User](/user.md)
{% endcontent-ref %}

Learn to access and use the Platform via both its command-line interface and its user interface.

{% content-ref url="/pages/-LdQr7rvq2zhRpEK4rP1" %}
[Developer](/developer.md)
{% endcontent-ref %}

Learn to manage data, users, and work on the Platform, via its API. Create and share reusable pipelines, applications for analyzing data, custom viewers, and workflows.

{% content-ref url="/pages/-LdQtjyNiYG7fi\_tNwvJ" %}
[Administrator](/admin.md)
{% endcontent-ref %}

Admin content is targeted towards organizational leads who have the permission to enable others to use DNAnexus for scientific purposes. Operations include managing organization permissions, billing, and authentication to the platform.

{% content-ref url="/pages/-LdQr7ryg3rwqK7avZ0q" %}
[Downloads](/downloads.md)
{% endcontent-ref %}

Download, install, and get started using the DNAnexus Platform SDK, the DNAnexus upload and download agents, and dxCompiler.

{% content-ref url="/pages/-LdQr7rzmwc90OJRpxKw" %}
[Release Notes](/release-notes.md)
{% endcontent-ref %}

Get details on new features, changes, and bug fixes for each Platform and toolkit release.


---

# Agent Instructions
This documentation is published with GitBook. GitBook is the documentation platform designed so that both humans and AI agents can read, navigate, and reason over technical content effectively. Learn more at gitbook.com.

## Querying This Documentation
If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter, and the optional `goal` query parameter:

```
GET https://documentation.dnanexus.com/readme.md?ask=<question>&goal=<endgoal>
```

`ask` is the immediate question: it should be specific, self-contained, and written in natural language.
`goal` is optional and describes the broader end goal you are ultimately trying to accomplish on behalf of the user. GitBook uses it to tailor the answer towards what is most useful for that goal.

The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
