dx run
command to achieve this goal. For example, if you create a workflow called "Trio Exome Workflow - Jan 1st 2020 9:00am" in your project, you can run it from the command line in this way:\
that is needed to escape the :
in the workflow name.dx run <workflow> --input name=stage_id:value
, where stage_id is a numeric ID starting at 0. More help can be found by running the commands dx run --help
and dx run <workflow> --help
.